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By browsing through the GDC Data Portal, users can obtain details about specific aspects of the GDC harmonized data, such as the associated project, files, participants and annotations (explanatory comments about the data). Using advanced data modeling, GDC Data Portal users can navigate between pages and results in a seamless and consistent manner. For example, from a project page a user can be redirected to all files or participants within the project. While users are browsing through the portal, they can progressively add more elements to a personalized cart for data download.
The GDC Data Portal provides access to GDC harmonized data as well as an archive of legacy data from TCGA and other NCI programs. Through the GDC Data Portal, users can launch the Legacy Archive Portal to search and download legacy files.
Searching through the GDC Data Portal, allows researchers to add files to their personalized cart. The cart provides detailed statistics about the files it contains in order for the user to have a better understanding of the overall volume of files the user may want to download.
When downloading data via the GDC Data Transfer Tool, the GDC Data Portal generates a file manifest that can be easily imported into the GDC Data Transfer Tool to initiate the download. Note that users can only download files they have access to through the NIH database of Genotypes and Phenotypes (dbGaP). Please visit Obtaining Access to GDC Data and Resources for information about how to obtain permission to access controlled data sets through dbGaP.
The GDC Data Portal provides an image viewing option allowing researchers to view, zoom, and pan slide images associated with a case. Slide images can also be downloaded in the original format (SVS) and are accessible via the GDC API.
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